Bioinformatician (F/m/d) in Bioinformatics Core Unit

vor 6 Monaten

Wien, Österreich St. Anna Kinderkrebsforschung Vollzeit

**Location**:
**Research group**:
**Working hours**:

- Vienna
- Bioinformatics Core Unit- full-time

As a bioinformatician, you will conduct analyses of genomics data from childhood /adult cancers, hereditary diseases and cancer predisposition syndromes in close collaboration with molecular biologists, geneticists, pediatric oncologists and other bioinformaticians. Examples of recent projects include the development of bioinformatic algorithms based on long-read panel sequencing technology for diagnostic approaches as well as genomic, transcriptomic and epigenomic analyses of pediatric leukemia and solid tumors on primary tumors and liquid biopsies, and the analysis of experimental model systems (e.g. Shahin T et al _Science Immunology_ 2021; Halbritter et al _Cancer Discovery_ 2019; Peneder P*, Stütz AM* et al _Nature Communications_ 2021; Popitsch et al _Bioinformatics_ 2021 and Schinnerl et al _Haematologica_ 2019). The research institute St. Anna CCRI is also involved in several large-scale national and international research collaborations and serves as a national reference center for several clinical trials.

The position is focused on acting as a new active member in the young and dynamic bioinformatics core unit and as service provider for the different research groups at St. Anna CCRI but also offers opportunities for independent and applied research of novel bioinformatics methodologies related to the St. Anna CCRI research programs.

**Your responsibilities**:

- You will lead bioinformatics design and analyses of ”omics” datasets (bulk/ single-cell RNA sequencing, ATAC-seq, ChIP-seq,) and integration with other data sources as required
- You will provide bioinformatics support to different research groups at St. Anna CCRI as well as diagnostic groups at Labdia and provide guidance/supervision to group-associated bioinformaticians
- You will evaluate new open-source and commercial software packages for analysis, annotation, and interpretation of sequencing and cytogenomic data, and integrate with existing bioinformatics and genomics databases including in-house developed pipelines
- You will document all procedures, reliably and actively communicate results to other bioinformaticians, researchers, the diagnostic teams and clinicians
- You will keep up-to-date with current developments in the field, contribute ideas and help in designing novel cutting-edge genomics projects and diagnostic approaches

**Your profile**:

- Master's or PhD degree or proven track record in bioinformatics, computational biology or data analysis
- Strong interest in cancer genomics and applied research; background in molecular genetics is of advantage
- Experience in applied NGS data analysis such as transcriptomics (RNA-seq, scRNA-seq), panel sequencing (RNA, DNA, liquid biopsies), Whole Exome/Genome sequencing (WES/WGS), long-read sequencing (e.g. Oxford Nanopore) and Epigenomics (WGBS, ChIP-seq, ATAC-seq); additional experience with other omics methods is a plus
- Demonstrable experience in programming languages required for data analysis (R and/or Python); experience with other programming languages is of advantage
- Proficiency with Linux/Unix; experience with HPC is of advantage
- Experience in building and maintaining bioinformatics tools/pipelines; experience with scientific and/or diagnostic software development is of advantage
- A solid foundation in statistics
- Ability to work independently, self-motivated and creatively
- Excellent communication skills in English with the ability to communicate effectively at different levels of technical knowledge

**Our offer**:

- A meaningful, inspiring, and international environment
- An outstanding working atmosphere in a strong team with excellent research and development opportunities, find more info on Kununu and Glassdoor
- Access to state-of-the-art infrastructure
- Flexible working hours, possibility of working from home, discounted lunch and other great benefits
- Great location in the center of Vienna, a capital of biomedical research in Europe with excellent quality of life A fair and attractive salary package starting at € 3.275,
- gross (14x per year, full-time basis) depending on your qualification and experience

**Who we are**:
The St. Anna Children's Cancer Research Institute (St. Anna CCRI) is located in the heart of Vienna, the most livable city in the world and one of the most important sites for biomedical research in Europe. St. Anna CCRI is a multidisciplinary and internationally networked center of excellence whose goal is to contribute to a sustainable improvement in the cure rates of childhood and adolescent cancers through innovative research and development. Due to the close cooperation between clinic and research, St. Anna Children's Cancer Research offers the ideal environment for cutting-edge research at a high international level and its implementation in clinical practice.

St. Anna CCRI is an equal opportunity employer. We value

  • Lead Bioinformatician

    vor 6 Monaten

    Wien, Österreich MUW - Institut für Medizinische Genetik Vollzeit

    The Institute of Medical Genetics at the Medical University of Vienna provides clinical genetic diagnoses for Vienna and the surrounding area. We offer the most up-to-date technologies to diagnose various aspects of genetic diseases. As an academic institution we are continually improving our diagnostic methods through scientific research. Our research...

  • Assistentin (F/m/d) Für Unser Managementteam

    Vor 7 Tagen

    Wien, Österreich Arthur D. Little Services S.A.S. Vollzeit

    AssistentIn (f/m/d) für unser Managementteam **Overview** Als weltweit erstes Beratungsunternehmen und auch als erste internationale Strategieberatung in Österreich steht Arthur D. Little seit mehr als 130 Jahren an vorderster Front der Innovation. Wir sind als Vordenker anerkannt, der Strategie, Technologie zu bahnbrechender Innovation verbindet. Unsere...

  • Manager For The Scientific Computing Unit

    vor 4 Wochen

    Wien, Österreich EO Austria GmbH Vollzeit € 90.000

    Einleitung Our client is a dynamic, internationally renowned research institute, founded in 2009, with the prestigious right to award PhDs. The Scientific Computing Facility plays a crucial role in supporting groundbreaking research by providing high-performance computing, software support and bioinformatics services. With significant growth potential in...

  • Manager For The Scientific Computing Unit

    vor 4 Wochen

    Wien, Österreich EO Austria GmbH Vollzeit € 90.000

    Einleitung Our client is a dynamic, internationally renowned research institute, founded in 2009, with the prestigious right to award PhDs. The Scientific Computing Facility plays a crucial role in supporting groundbreaking research by providing high-performance computing, software support and bioinformatics services. With significant growth potential in...

  • Manager For The Scientific Computing Unit

    vor 4 Wochen

    Wien, Österreich EO Austria GmbH Vollzeit € 90.000

    Einleitung Our client is a dynamic, internationally renowned research institute, founded in 2009, with the prestigious right to award PhDs. Dedicated to cutting-edge, fundamental scientific research, the institute fosters an environment where world-class innovation thrives. Researchers work in a highly collaborative, state-of-the-art setting, pushing the...

  • Manager For The Scientific Computing Unit

    vor 4 Wochen

    Wien, Österreich EO Austria GmbH Vollzeit € 90.000

    Einleitung Our client is a dynamic, internationally renowned research institute, founded in 2009, with the prestigious right to award PhDs. Dedicated to cutting-edge, fundamental scientific research, the institute fosters an environment where world-class innovation thrives. Researchers work in a highly collaborative, state-of-the-art setting, pushing the...

  • Administrative Clerk

    vor 6 Monaten

    Wien, Österreich U.S. Embassy in Austria Vollzeit

    The U.S. Embassy in Vienna is recruiting for an Administrative Clerk (M/F/d) Part-Time Position (30 hours/week) **Qualifications we seek**: We are looking for an efficient team-player with effective communication skills, attention to detail, and excellent customer service orientation. Also helpful are the ability to anticipate office needs and to interact...

  • Bioinformatician/ Data Scientist

    vor 6 Monaten

    Wien, Österreich Solgate GmbH Vollzeit

    About Solgate Solgate is a new research-driven biopharmaceutical startup that develops drugs targeting solute carrier (SLC) proteins, the largest family of membrane transporters. By modulating the function of the “gates” to cellular metabolism, Solgate aims to address unmet medical needs in neurological diseases, in metabolic disorders and in cancer....

  • Contracting Specialist

    vor 12 Stunden

    Wien, Österreich U.S. Embassy in Vienna Vollzeit

    Join the U.S. Embassy in Austria's General Services Office as a: CONTRACTING SPECIALIST (F/M/D) DUTIES AND RESPONSIBILITIES: The incumbent serves as one of two Contracting Specialists at post, who negotiates and prepares formal solicitations and contracts for a wide variety of acquisitions for values up to and exceeding the standard $250,000 - contracting...

  • Procurement Agent

    vor 6 Monaten

    Wien, Österreich U.S. Embassy in Austria Vollzeit

    The U.S. Embassy in Vienna is recruiting for a Procurement Agent (M/F/d) **Responsibilities**: The incumbent of this position in the General Services Office procures a variety of goods and services for the three U.S. Missions in Vienna(Tri-Mission), acts as official purchase card holder procuring goods and services up to USD 10,000, is responsible for...

  • Netzwerkentwickler (m/w/d) - .Net Core

    vor 2 Monaten

    Wien, Wien, Österreich Kontron S&T Group Vollzeit

    C#/.Net Entwickler (m/w/d) - .Net CoreStandort: Wien (teilweise Remotetätigkeiten möglich), ÖsterreichKontron Technologies bietet die Kombination aus Prozess- und Businessconsulting sowie die Entwicklung hochqualitativer IT-Lösungen und professionelle Dienstleistungen, alles aus einer Hand. Bei uns erwarten dich mehrere Teams mit unterschiedlichen...

  • Manager for The Scientific Computing Unit

    vor 2 Monaten

    Wien, Österreich EO Austria GmbH Vollzeit

    Our client is a dynamic, internationally renowned research institute, founded in 2009, with the prestigious right to award PhDs. Dedicated to cutting-edge, fundamental scientific research, the institute fosters an environment where world-class innovation thrives. Researchers work in a highly collaborative, state-of-the-art setting, pushing the boundaries of...

  • .Net Developer It

    vor 1 Monat

    Wien, Österreich Österreichische Post AG Vollzeit € 50.000

    Net Developer IT (f/m/d) Standort: Informationstechnologie Who we are and what drives us Our passion at Österreichische Post AG is the carriage of letters, advertising materials, print media, and parcels. You will work on developing the technical core of the country's leading logistics and postal service provider as part of a team of IT specialists. The...

  • Ecommerce Manager

    vor 6 Monaten

    Wien, Österreich Voestalpine AG Vollzeit

    **Job-ID**:V000009327 - **Location**:Vienna - **Start date**:as soon as possible - **Working Hours**:Full-time **Introduction **Introduction**Introduction*** voestalpine High Performance Metals GmbH is the parent company of the voestalpine High Performance Metals Division in the voestalpine Group. We are the global market leader for tool steel and a...

  • Amazon Europe Core Program Implementation Specialist

    vor 1 Woche

    Wien, Wien, Österreich Amazon Europe Core Vollzeit

    Program Implementation Specialist Opportunity at Amazon Europe CoreThis position requires relocation to Bratislava, where you will be supported by Amazon's relocation package. As a Program Implementation Specialist, you will play a crucial role in driving Amazon Business (AB) adoption across Europe. Your primary objective will be to support EU Customer...

  • Network Expert

    vor 6 Monaten

    Wien, Österreich Generali Group Vollzeit

    We dare to trust - this is our employer promise in Generali Versicherung AG. We have the courage to take on challenges and are successful in many areas. This is why we are not only successful internationally, but also market leader in Austria in major insurance sectors. We also show courage as we give our employees a lot of autonomy - whether in terms of...

  • Supply Chain Solution Specialist

    vor 2 Monaten

    Wien, Österreich voestalpine Edelstahl GmbH Vollzeit

    Voestalpine High Performance Metals GmbH is the parent company of the High Performance Metals Division in the voestalpine Group. We are the global market leader in tool steel and also hold leading positions in high-speed steel, valve steel, special engineering steel and other special grades. Customers (m/f/d) can rely on our well-established brands that have...

  • Security Risk and Reporting Expert

    vor 6 Monaten

    Wien, Österreich Generali Group Vollzeit

    We dare to trust - this is our employer promise in Generali Versicherung AG. We have the courage to take on challenges and are successful in many areas. This is why we are not only successful internationally, but also market leader in Austria in major insurance sectors. We also show courage as we give our employees a lot of autonomy - whether in terms of...

  • Supervisory Administrative Assistant

    vor 6 Monaten

    Wien, Österreich U.S. Embassy in Austria Vollzeit

    The U.S. Embassy in Vienna is recruiting for a Supervisory Administrative Assistant (M/F/d) **Responsibilities**: The incumbent of this position will be part of a team, designated for a building project of the U.S. Embassy with a duration of approximately 3 years. The project is managed by the Overseas Buildings Operations Office (OBO) and the incumbent...

  • Phd Student

    vor 7 Monaten

    Wien, Österreich St. Anna Kinderkrebsforschung Vollzeit

    **Location**: **Research group**: **Working hours**: - Vienna - George Cresswell Group- Fulltime - Are you interested in working in an ambitious team that combines genomics - and tumor evolution to better understand pediatric cancers?- Here is your chance to contribute to science that makes a difference!The Cresswell Group is recruiting a PhD student...