Bioinformatician (F/m/d) in Bioinformatics Core Unit

vor 2 Wochen

Wien, Österreich St. Anna Kinderkrebsforschung Vollzeit

**Location**:
**Research group**:
**Working hours**:

- Vienna
- Bioinformatics Core Unit- full-time

As a bioinformatician, you will conduct analyses of genomics data from childhood /adult cancers, hereditary diseases and cancer predisposition syndromes in close collaboration with molecular biologists, geneticists, pediatric oncologists and other bioinformaticians. Examples of recent projects include the development of bioinformatic algorithms based on long-read panel sequencing technology for diagnostic approaches as well as genomic, transcriptomic and epigenomic analyses of pediatric leukemia and solid tumors on primary tumors and liquid biopsies, and the analysis of experimental model systems (e.g. Shahin T et al _Science Immunology_ 2021; Halbritter et al _Cancer Discovery_ 2019; Peneder P*, Stütz AM* et al _Nature Communications_ 2021; Popitsch et al _Bioinformatics_ 2021 and Schinnerl et al _Haematologica_ 2019). The research institute St. Anna CCRI is also involved in several large-scale national and international research collaborations and serves as a national reference center for several clinical trials.

The position is focused on acting as a new active member in the young and dynamic bioinformatics core unit and as service provider for the different research groups at St. Anna CCRI but also offers opportunities for independent and applied research of novel bioinformatics methodologies related to the St. Anna CCRI research programs.

**Your responsibilities**:

- You will lead bioinformatics design and analyses of ”omics” datasets (bulk/ single-cell RNA sequencing, ATAC-seq, ChIP-seq,) and integration with other data sources as required
- You will provide bioinformatics support to different research groups at St. Anna CCRI as well as diagnostic groups at Labdia and provide guidance/supervision to group-associated bioinformaticians
- You will evaluate new open-source and commercial software packages for analysis, annotation, and interpretation of sequencing and cytogenomic data, and integrate with existing bioinformatics and genomics databases including in-house developed pipelines
- You will document all procedures, reliably and actively communicate results to other bioinformaticians, researchers, the diagnostic teams and clinicians
- You will keep up-to-date with current developments in the field, contribute ideas and help in designing novel cutting-edge genomics projects and diagnostic approaches

**Your profile**:

- Master's or PhD degree or proven track record in bioinformatics, computational biology or data analysis
- Strong interest in cancer genomics and applied research; background in molecular genetics is of advantage
- Experience in applied NGS data analysis such as transcriptomics (RNA-seq, scRNA-seq), panel sequencing (RNA, DNA, liquid biopsies), Whole Exome/Genome sequencing (WES/WGS), long-read sequencing (e.g. Oxford Nanopore) and Epigenomics (WGBS, ChIP-seq, ATAC-seq); additional experience with other omics methods is a plus
- Demonstrable experience in programming languages required for data analysis (R and/or Python); experience with other programming languages is of advantage
- Proficiency with Linux/Unix; experience with HPC is of advantage
- Experience in building and maintaining bioinformatics tools/pipelines; experience with scientific and/or diagnostic software development is of advantage
- A solid foundation in statistics
- Ability to work independently, self-motivated and creatively
- Excellent communication skills in English with the ability to communicate effectively at different levels of technical knowledge

**Our offer**:

- A meaningful, inspiring, and international environment
- An outstanding working atmosphere in a strong team with excellent research and development opportunities, find more info on Kununu and Glassdoor
- Access to state-of-the-art infrastructure
- Flexible working hours, possibility of working from home, discounted lunch and other great benefits
- Great location in the center of Vienna, a capital of biomedical research in Europe with excellent quality of life A fair and attractive salary package starting at € 3.275,
- gross (14x per year, full-time basis) depending on your qualification and experience

**Who we are**:
The St. Anna Children's Cancer Research Institute (St. Anna CCRI) is located in the heart of Vienna, the most livable city in the world and one of the most important sites for biomedical research in Europe. St. Anna CCRI is a multidisciplinary and internationally networked center of excellence whose goal is to contribute to a sustainable improvement in the cure rates of childhood and adolescent cancers through innovative research and development. Due to the close cooperation between clinic and research, St. Anna Children's Cancer Research offers the ideal environment for cutting-edge research at a high international level and its implementation in clinical practice.

St. Anna CCRI is an equal opportunity employer. We value

  • Bioinformatician in Development and Disease

    vor 3 Monaten

    Wien, Österreich Research Institute of Molecular Pathology Vollzeit

    The ERC-funded Pauli and Obenauf Groups at the Research Institute of Molecular Pathology (IMP) in Vienna, Austria, are jointly recruiting a highly motivated **bioinformatician with interest in biology**. He/she will work on research projects that focus on elucidating molecular mechanisms in development and cancer biology. **Bioinformatician in Development...

  • Lead Bioinformatician

    vor 2 Wochen

    Wien, Österreich MUW - Institut für Medizinische Genetik Vollzeit

    The Institute of Medical Genetics at the Medical University of Vienna provides clinical genetic diagnoses for Vienna and the surrounding area. We offer the most up-to-date technologies to diagnose various aspects of genetic diseases. As an academic institution we are continually improving our diagnostic methods through scientific research. Our research...

  • Lead Bioinformatician

    vor 2 Wochen

    Wien, Wien, Österreich MUW - Institut für Medizinische Genetik Vollzeit

    The Institute of Medical Genetics at the Medical University of Vienna provides clinical genetic diagnoses for Vienna and the surrounding area. We offer the most up-to-date technologies to diagnose various aspects of genetic diseases. As an academic institution we are continually improving our diagnostic methods through scientific research.Our research group...

  • Senior Bioinformatician

    vor 3 Wochen

    Wien, Österreich IST Austria Vollzeit

    Full Time (40 h/w) Klosterneuburg (Vienna), Austria / Home Office possible 53,200* gross/year Your Responsibilities You not only have expertise and experience working with single-cell and/or bulk sequencing data, you are also eager to stay up-to date with the latest developments in genomics and bioinformatics. At ISTA, you will work closely with...

  • Computational Biology

    Vor 4 Tagen

    Wien, Österreich Springer Nature Vollzeit

    **Computational Biology / Bioinformatics Project Scientist to join the Superti-Furga Lab (M/F/d)**: - Employer- Research Center for Molecular Medicine (CeMM), ÖAW- Location- Vienna (Landbezirke) (AT)- Salary- 66,528 per annum+ benefits- Closing date- 7 May 2024- Discipline Life Science Job Type Bioinformatician Employment - Hours Full time Duration ...

  • Postdoc for Bioinformatics

    vor 4 Wochen

    Wien 9. Bezirk (Alsergrund), W, Österreich Medizinische Universität Wien Vollzeit

    The Medical University of Vienna seeks to fill the Position from 03.06.2024 of a **Postdoc for Bioinformatics** **at the Joint Microbiome Facility** **of the University of Vienna and Medical University of Vienna** **Reference number**: 395/24 We are searching for a Senior Scientist with outstanding expertise in bioinformatics and...

  • Postdoc for Bioinformatics

    vor 2 Wochen

    Wien . Bezirk (Alsergrund), W, Österreich Medizinische Universität Wien Vollzeit

    The Medical University of Vienna seeks to fill the Position from of aPostdoc for Bioinformaticsat the Joint Microbiome Facilityof the University of Vienna and Medical University of ViennaReference number: 395/24We are searching for a Senior Scientist with outstanding expertise in bioinformatics and next-generation-sequencing methods relevant to the study of...

  • Bioinformatician

    vor 2 Wochen

    Wien, Wien, Österreich Universität Wien Vollzeit

    The University of Vienna (20 faculties and centres, 184 fields of study, approx members of staff, about students) seeks to fill the position as soon as possible of aBioinformaticianattheDepartment of Structural and Computational BiologyReference number:13901The research groups of Arndt von Haeseler and Jörg Menche at the Max Perutz Labs at the University of...

  • Administrative Clerk

    vor 3 Wochen

    Wien, Österreich U.S. Embassy in Vienna Vollzeit

    The U.S. Embassy in Vienna is recruiting for an Administrative Clerk (M/F/d) in the Health Unit **Responsibilities**: The Embassy provides medical support to its employees and diplomats in a clinic with the Embassy doctor and Medical Specialists. The Administrative Assistant executes all administrative functions and responsibilities for the Health Unit,...

  • Postdoc for Bioinformatics at The Joint Microbiome

    vor 2 Wochen

    Wien . Bezirk (Alsergrund), W, Österreich Medizinische Universität Wien Vollzeit

    The Medical University of Vienna seeks to fill the Position from of aPostdoc for Bioinformaticsat the Joint Microbiome Facilityof the University of Vienna and Medical University of ViennaReference number: 10818/22Extent of Employment: 40 hours/weekJob grading in accordance with collective bargaining agreement: -48 VwGr. B1 lit. b (postdoc) with relevant work...

  • Core Technician

    vor 2 Wochen

    Wien, Wien, Österreich Vienna Biocenter Core Facilities GmbH Vollzeit

    ENABLE NEW DISCOVERIES.The Vienna BioCenter Core Facilities GmbH (VBCF) acts as a nexus for science and technology and enables scientific discoveries by its collaborative spirit and access to state-of-the art technologies. We are seeking to expand our team with aCore technician (f/m/d, full-time)to support our Vienna Drosophila Resource Center team. The...

  • Bioinformatician in Development and Disease

    vor 3 Monaten

    Wien, Österreich Forschungsinstitut für Molekulare Pathologie GmbH (IMP) Vollzeit

    **Your Tasks** - **Software and technology development**:Implement cutting-edge software and analysis pipelines for data analysis to formulate hypotheses which will then be tested in our experimental systems. - **Become an integral member of our teams** with deep intellectual project involvement and close interactions with wet lab scientists: Lead...

  • Bioinformatician/ Data Scientist

    Vor 6 Tagen

    Wien, Österreich Solgate GmbH Vollzeit

    About Solgate Solgate is a new research-driven biopharmaceutical startup that develops drugs targeting solute carrier (SLC) proteins, the largest family of membrane transporters. By modulating the function of the “gates” to cellular metabolism, Solgate aims to address unmet medical needs in neurological diseases, in metabolic disorders and in cancer....

  • Bioinformatician/ Data Scientist

    vor 2 Wochen

    Wien, Wien, Österreich Solgate GmbH Vollzeit

    About SolgateSolgate is a new research-driven biopharmaceutical startup that develops drugs targeting solute carrier (SLC) proteins, the largest family of membrane transporters. By modulating the function of the "gates" to cellular metabolism, Solgate aims to address unmet medical needs in neurological diseases, in metabolic disorders and in cancer. Solgate...

  • Computational Biology

    vor 2 Wochen

    Wien, Wien, Österreich Springer Nature Vollzeit

    Computational Biology / Bioinformatics Project Scientist to join the Superti-Furga Lab (M/F/d):EmployerResearch Center for Molecular Medicine (CeMM), ÖAWLocationVienna (Landbezirke) (AT)Salary66,528 per annum+ benefitsClosing date7 May 2024Discipline Life Science Job Type Bioinformatician Employment - Hours Full time Duration Fixed term Qualification PhD...

  • Core Banking Systems Expert

    vor 3 Wochen

    Wien, Österreich Raiffeisen Bank International Vollzeit

    **Core Banking Systems Expert (f/m/x)**: The RBI Core Banking Systems (CBS) department manages core banking activities of RBI Group and provides support and expertise to Head Office and 11 Raiffeisen Network Banks (NWBs) running core banking systems from various vendors. As a Core Banking Systems Expert, you will be part of the CBS team in Vienna, who works...

  • Master Thesis

    vor 3 Wochen

    Wien, Österreich Boehringer Ingelheim Vollzeit

    **Master Thesis (f/m/d) - Computational identification of cancer targets** **-** **232173** **THE POSITION** The internship position (12 months duration) should start ideally as soon as possible. **Tasks & responsibilities** - Mining and annotation of large cancer patient and cell line datasets - Establishment and usage of computational methods to...

  • Developer (m/w/d) - .Net Core Entwicklung

    vor 2 Wochen

    Wien, Wien, Österreich Kontron S&T Group Vollzeit

    C#/.Net Developer (m/w/d) - .Net Core Entwicklung Location: Wien (teilweise Remotetätigkeiten möglich), Austria Kontron Technologies bietet die Kombination aus Prozess- und Businessconsulting sowie die Entwicklung hochqualitativer IT-Lösungen und professionelle Dienstleistungen, alles aus einer Hand. Bei uns erwarten dich mehrere Teams mit...

  • Junior Cost Controller

    vor 4 Wochen

    Wien, Österreich Raiffeisen Bank International Vollzeit

    **Junior Cost Controller (f/m/x)**: - We are looking for a motivated person who brings some - **Cost Controlling Know How **to the table and wants to further broaden his/her knowledge on - **Cost Controlling Processes, **specializing in - **Standard Unit Cost Calculation (SUC).** Together with our Experts you will be responsible for the - **SUC operational...

  • AssistentIn (f/m/d) für unser Managementteam

    Vor 2 Tagen

    Wien, Österreich Arthur D. Little Austria GmbH Vollzeit

    JOIN OUR TEAM:AssistentIn (f/m/d) für unser ManagementteamDeine Aufgaben:* Organisiere und unterstütze unsere Partner in allen organisatorischen und administrativen Belangen* Manage komplexe internationale Termine und Reisen, inklusive Spesenabrechnungen* Plane und organisiere spannende interne und externe Events* Koordiniere Roadshows und Konferenzen mit...